interactiveDisplayBase
Base package for enabling powerful shiny web displays of Bioconductor objects
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scater Single-Cell Analysis Toolkit for Gene Expression Data in R
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mzR parser for netCDF, mzXML and mzML and mzIdentML files (mass spectrometry data)
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BiocStyle Standard styles for vignettes and other Bioconductor documents
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phyloseq Handling and analysis of high-throughput microbiome census data
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Gviz Plotting data and annotation information along genomic coordinates
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xcms LC-MS and GC-MS Data Analysis
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minfi Analyze Illumina Infinium DNA methylation arrays
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dada2 Accurate, high-resolution sample inference from amplicon sequencing data
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Seqinfo A simple S4 class for storing basic information about a collection of genomic sequences
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ExperimentHub Client to access ExperimentHub resources
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pcaMethods A collection of PCA methods
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biomformat An interface package for the BIOM file format