chromVAR

Extra Credit builds an outline of chromVAR's docs the first time your work uses it. Until then, start at the official documentation.

• TCGAutils TCGA utility functions for data management
• Spectra Spectra Infrastructure for Mass Spectrometry Data
• TreeSummarizedExperiment TreeSummarizedExperiment: a S4 Class for Data with Tree Structures
• zellkonverter Conversion Between scRNA-seq Objects
• alabaster.base Save Bioconductor Objects to File
• Mfuzz Soft clustering of omics time series data
• BeadDataPackR Compression of Illumina BeadArray data
• alabaster.se Load and Save SummarizedExperiments from File
• Wrench Wrench normalization for sparse count data
• methylKit DNA methylation analysis from high-throughput bisulfite sequencing results
• SeqArray Data management of large-scale whole-genome sequence variant calls using GDS files
• alabaster.matrix Load and Save Artifacts from File