GSVA
Gene Set Variation Analysis for Microarray and RNA-Seq Data
- Category
- Bioconductor packages
Official docs outline
bioconductor.orgExtra Credit builds an outline of GSVA's docs the first time your work uses it. Until then, start at the official documentation.
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All 300- minfi Analyze Illumina Infinium DNA methylation arrays
- dada2 Accurate, high-resolution sample inference from amplicon sequencing data
- Seqinfo A simple S4 class for storing basic information about a collection of genomic sequences
- ExperimentHub Client to access ExperimentHub resources
- pcaMethods A collection of PCA methods
- biomformat An interface package for the BIOM file format
- scran Methods for Single-Cell RNA-Seq Data Analysis
- DNAcopy DNA Copy Number Data Analysis
- KEGGgraph KEGGgraph: A graph approach to KEGG PATHWAY in R and Bioconductor
- pathview a tool set for pathway based data integration and visualization
- gcrma Background Adjustment Using Sequence Information
- EBImage Image processing and analysis toolbox for R