GenomicFeatures

Extra Credit builds an outline of GenomicFeatures's docs the first time your work uses it. Until then, start at the official documentation.

• KEGGREST Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)
• GenomicAlignments Representation and manipulation of short genomic alignments
• annotate Annotation for microarrays
• flowCore flowCore: Basic structures for flow cytometry data
• DESeq2 Differential gene expression analysis based on the negative binomial distribution
• edgeR Empirical Analysis of Digital Gene Expression Data in R
• genefilter genefilter: methods for filtering genes from high-throughput experiments
• Rhtslib HTSlib high-throughput sequencing library as an R package
• graph graph: A package to handle graph data structures
• rhdf5 R Interface to HDF5
• BiocFileCache Manage Files Across Sessions
• S4Arrays Foundation of array-like containers in Bioconductor