basilisk
Freezing Python Dependencies Inside Bioconductor Packages
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- Bioconductor packages
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MsCoreUtils Core Utils for Mass Spectrometry Data
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cigarillo Efficient manipulation of CIGAR strings
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DropletUtils Utilities for Handling Single-Cell Droplet Data
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gdsfmt R Interface to CoreArray Genomic Data Structure (GDS) Files
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maftools Summarize, Analyze and Visualize MAF Files
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DEXSeq Inference of differential exon usage in RNA-Seq
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CNEr CNE Detection and Visualization
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regioneR Association analysis of genomic regions based on permutation tests
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BiocCheck Bioconductor-specific package checks
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ChIPpeakAnno Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments, or any experiments that result in large number of geno
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pwalign Perform pairwise sequence alignments
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MassSpecWavelet Peak Detection for Mass Spectrometry data using wavelet-based algorithms