SingleR
Reference-Based Single-Cell RNA-Seq Annotation
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- Bioconductor packages
Official docs outline
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ChemmineR Cheminformatics Toolkit for R
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DynDoc Dynamic document tools
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SpatialExperiment S4 Class for Spatially Resolved -omics Data
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glmGamPoi Fit a Gamma-Poisson Generalized Linear Model
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mzID An mzIdentML parser for R
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dir.expiry Managing Expiration for Cache Directories
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oligoClasses Classes for high-throughput arrays supported by oligo and crlmm
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ConsensusClusterPlus ConsensusClusterPlus
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graphite GRAPH Interaction from pathway Topological Environment
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Rsubread Mapping, quantification and variant analysis of sequencing data
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lumi BeadArray Specific Methods for Illumina Methylation and Expression Microarrays
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aroma.light Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types