RcisTarget

Extra Credit builds an outline of RcisTarget's docs the first time your work uses it. Until then, start at the official documentation.

• GreyListChIP Grey Lists -- Mask Artefact Regions Based on ChIP Inputs
• genomation Summary, annotation and visualization of genomic data
• MultiDataSet Implementation of MultiDataSet and ResultSet
• singscore Rank-based single-sample gene set scoring method
• MLInterfaces Uniform interfaces to R machine learning procedures for data in Bioconductor containers
• SRAdb A compilation of metadata from NCBI SRA and tools
• UCell Rank-based signature enrichment analysis for single-cell data
• EnrichedHeatmap Making Enriched Heatmaps
• tradeSeq trajectory-based differential expression analysis for sequencing data
• RankProd Rank Product method for identifying differentially expressed genes with application in meta-analysis
• dittoSeq User Friendly Single-Cell and Bulk RNA Sequencing Visualization
• RCy3 Functions to Access and Control Cytoscape