oligo

Extra Credit builds an outline of oligo's docs the first time your work uses it. Until then, start at the official documentation.

• cummeRbund Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data.
• apeglm Approximate posterior estimation for GLM coefficients
• EnhancedVolcano Publication-ready volcano plots with enhanced colouring and labeling
• DirichletMultinomial Dirichlet-Multinomial Mixture Model Machine Learning for Microbiome Data
• metapod Meta-Analyses on P-Values of Differential Analyses
• seqLogo Sequence logos for DNA sequence alignments
• BiocBaseUtils Utility and internal functions for Bioconductor packages
• monocle Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq
• TFBSTools Software Package for Transcription Factor Binding Site (TFBS) Analysis
• assorthead Assorted Header-Only C++ Libraries
• snpStats SnpMatrix and XSnpMatrix classes and methods
• ChemmineR Cheminformatics Toolkit for R