metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
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All 300- bsseq Analyze, manage and store whole-genome methylation data
- msa Multiple Sequence Alignment
- tkWidgets R based tk widgets
- mosaics MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq)
- basilisk.utils Centralized Conda Installation for Bioconductor Packages
- AUCell AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
- flowStats Statistical methods for the analysis of flow cytometry data
- scDblFinder
- ReportingTools Tools for making reports in various formats
- microbiome Microbiome Analytics
- TrajectoryUtils Single-Cell Trajectory Analysis Utilities
- mia Microbiome analysis