GlobalAncova
Global test for groups of variables via model comparisons
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CAMERA Collection of annotation related methods for mass spectrometry data
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zinbwave Zero-Inflated Negative Binomial Model for RNA-Seq Data
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Rdisop Decomposition of Isotopic Patterns
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gypsum Interface to the gypsum REST API
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baySeq Empirical Bayesian analysis of patterns of differential expression in count data
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quantsmooth Quantile smoothing and genomic visualization of array data
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MsFeatures Functionality for Mass Spectrometry Features
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ALDEx2 Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account
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Icens NPMLE for Censored and Truncated Data
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Heatplus Heatmaps with row and/or column covariates and colored clusters
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affycoretools Functions useful for those doing repetitive analyses with Affymetrix GeneChips
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GENIE3 GEne Network Inference with Ensemble of trees