geneplotter

Extra Credit builds an outline of geneplotter's docs the first time your work uses it. Until then, start at the official documentation.

• S4Arrays Foundation of array-like containers in Bioconductor
• SparseArray High-performance sparse data representation and manipulation in R
• Rhdf5lib hdf5 library as an R package
• preprocessCore A collection of pre-processing functions
• BSgenome Software infrastructure for efficient representation of full genomes and their SNPs
• clusterProfiler A Universal Enrichment Tool for Interpreting Omics Data
• ggtree an R package for visualization of tree and annotation data
• HDF5Array HDF5 datasets as array-like objects in R
• multtest Resampling-based multiple hypothesis testing
• enrichplot Visualization of Functional Enrichment Result
• fgsea Fast Gene Set Enrichment Analysis
• qvalue Q-value estimation for false discovery rate control