DSS

Extra Credit builds an outline of DSS's docs the first time your work uses it. Until then, start at the official documentation.

• openCyto Hierarchical Gating Pipeline for flow cytometry data
• txdbmaker Tools for making TxDb objects from genomic annotations
• GenomicFiles Distributed computing by file or by range
• ballgown Flexible, isoform-level differential expression analysis
• destiny Creates diffusion maps
• lpsymphony Symphony integer linear programming solver in R
• DMRcate Methylation array and sequencing spatial analysis methods
• tximeta Transcript Quantification Import with Automatic Metadata
• infercnv Infer Copy Number Variation from Single-Cell RNA-Seq Data
• ggcyto Visualize Cytometry data with ggplot
• Glimma Interactive visualizations for gene expression analysis
• survcomp Performance Assessment and Comparison for Survival Analysis