affxparser
Affymetrix File Parsing SDK
- Category
- Bioconductor packages
Official docs outline
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oligoClasses Classes for high-throughput arrays supported by oligo and crlmm
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ConsensusClusterPlus ConsensusClusterPlus
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graphite GRAPH Interaction from pathway Topological Environment
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Rsubread Mapping, quantification and variant analysis of sequencing data
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lumi BeadArray Specific Methods for Illumina Methylation and Expression Microarrays
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aroma.light Light-Weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types
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cytolib C++ infrastructure for representing and interacting with the gated cytometry data
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DECIPHER Tools for curating, analyzing, and manipulating biological sequences
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mixOmics Omics Data Integration Project
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ChIPseeker ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
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EDASeq Exploratory Data Analysis and Normalization for RNA-Seq
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h5mread A fast HDF5 reader