VariantAnnotation

Extra Credit builds an outline of VariantAnnotation's docs the first time your work uses it. Until then, start at the official documentation.

• treeio Base Classes and Functions for Phylogenetic Tree Input and Output
• SingleCellExperiment S4 Classes for Single Cell Data
• GOSemSim GO-terms Semantic Similarity Measures
• affy Methods for Affymetrix Oligonucleotide Arrays
• BiocNeighbors Nearest Neighbor Detection for Bioconductor Packages
• BiocIO Standard Input and Output for Bioconductor Packages
• impute impute: Imputation for microarray data
• DelayedMatrixStats Functions that Apply to Rows and Columns of 'DelayedMatrix' Objects
• ComplexHeatmap Make Complex Heatmaps
• ShortRead FASTQ input and manipulation
• beachmat Compiling Bioconductor to Handle Each Matrix Type
• Rgraphviz Provides plotting capabilities for R graph objects