R packages
2,000 in Packages and libraries, most used first. Page 3 of 10.
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mgcv Mixed GAM Computation Vehicle with Automatic Smoothness Estimation - pheatmap Pretty Heatmaps
- repurrrsive Examples of Recursive Lists and Nested or Split Data Frames
- ggiraph Make 'ggplot2' Graphics Interactive
- labelled Manipulating Labelled Data
- repr Serializable Representations
- RANN Fast Nearest Neighbour Search (Wraps ANN Library) Using L2 Metric
- boot Bootstrap Functions
- dotCall64 Enhanced Foreign Function Interface Supporting Long Vectors
- tidytree A Tidy Tool for Phylogenetic Tree Data Manipulation
- R.cache Fast and Light-Weight Caching (Memoization) of Objects and Results to Speed Up Computations
- kernlab Kernel-Based Machine Learning Lab
- bdsmatrix Routines for Block Diagonal Symmetric Matrices
- archdata Example Datasets from Archaeological Research
- lpSolve Interface to 'Lp_solve' v. 5.5 to Solve Linear/Integer Programs
- ggfun Miscellaneous Functions for 'ggplot2'
- modeltools Tools and Classes for Statistical Models
- spatstat.explore Exploratory Data Analysis for the 'spatstat' Family
- ggplotify Convert Almost Any Plot to a 'grob' or 'ggplot' Object
- logger A Lightweight, Modern and Flexible Logging Utility
- ellipse Functions for Drawing Ellipses and Ellipse-Like Confidence Regions
- mockery Mocking Library for R
- quarto R Interface to 'Quarto' Markdown Publishing System
- bookdown Authoring Books and Technical Documents with R Markdown
- spatstat.univar One-Dimensional Probability Distribution Support for the 'spatstat' Family
- foreign Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
- stringdist Approximate String Matching, Fuzzy Text Search, and String Distance Functions
- uwot The Uniform Manifold Approximation and Projection (UMAP) Method for Dimensionality Reduction
- pan Multiple Imputation for Multivariate Panel or Clustered Data
- rgl 3D Visualization Using OpenGL
- tidygraph A Tidy API for Graph Manipulation
- GGally Extension to 'ggplot2'
- nortest Tests for Normality
- visNetwork Network Visualization using 'vis.js' Library
- vdiffr Visual Regression Testing and Graphical Diffing
- xgboost Extreme Gradient Boosting
- mitml Tools for Multiple Imputation in Multilevel Modeling
- ggraph An Implementation of Grammar of Graphics for Graphs and Networks
- DescTools Tools for Descriptive Statistics
- effectsize Indices of Effect Size
- rJava Low-Level R to Java Interface
- gridGraphics Redraw Base Graphics Using 'grid' Graphics
- spatstat.sparse Sparse Three-Dimensional Arrays and Linear Algebra Utilities
- jomo Multilevel Joint Modelling Multiple Imputation
- graphlayouts Additional Layout Algorithms for Network Visualizations
- pdftools Text Extraction, Rendering and Converting of PDF Documents
- hunspell High-Performance Stemmer, Tokenizer, and Spell Checker
- ranger A Fast Implementation of Random Forests
- Seurat Tools for Single Cell Genomics
- combinat Combinatorics Utilities
- moments Moments, Cumulants, Skewness, Kurtosis and Related Tests
- clue Cluster Ensembles
- leaflet.providers Leaflet Providers
- spelling Tools for Spell Checking in R
- lintr A 'Linter' for R Code
- spatstat.data Datasets for 'spatstat' Family
- fitdistrplus Help to Fit of a Parametric Distribution to Non-Censored or Censored Data
- goftest Classical Goodness-of-Fit Tests for Univariate Distributions
- TMB Template Model Builder: A General Random Effect Tool Inspired by 'ADMB'
- Rtsne T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
- slider Sliding Window Functions
- dqrng Fast Pseudo Random Number Generators
- pbivnorm Vectorized Bivariate Normal CDF
- bbmle Tools for General Maximum Likelihood Estimation
- warp Group Dates
- restfulr R Interface to RESTful Web Services
- slam Sparse Lightweight Arrays and Matrices
- ca Simple, Multiple and Joint Correspondence Analysis
- flashClust Implementation of Fast Hierarchical Clustering
- AsioHeaders 'Asio' C++ Header Files
- rootSolve Nonlinear Root Finding, Equilibrium and Steady-State Analysis of Ordinary Differential Equations
- reshape Flexibly Reshape Data
- rentrez 'Entrez' in R
- spdep Spatial Dependence: Weighting Schemes, Statistics
- nleqslv Solve Systems of Nonlinear Equations
- strucchange Testing, Monitoring, and Dating Structural Changes
- servr A Simple HTTP Server to Serve Static Files or Dynamic Documents
- tinytest Lightweight and Feature Complete Unit Testing Framework
- microbenchmark Accurate Timing Functions
- gtsummary Presentation-Ready Data Summary and Analytic Result Tables
- stars Spatiotemporal Arrays, Raster and Vector Data Cubes
- rsconnect Deploy Docs, Apps, and APIs to 'Posit Connect', 'shinyapps.io', and 'RPubs'
- vcd Visualizing Categorical Data
- styler Non-Invasive Pretty Printing of R Code
- fastDummies Fast Creation of Dummy (Binary) Columns and Rows from Categorical Variables
- RcppAnnoy 'Rcpp' Bindings for 'Annoy', a Library for Approximate Nearest Neighbors
- websocket 'WebSocket' Client Library
- lmom L-Moments
- metafor Meta-Analysis Package for R
- sitmo Parallel Pseudo Random Number Generator (PPRNG) 'sitmo' Header Files
- interp Interpolation Methods
- rsample General Resampling Infrastructure
- mathjaxr Using 'Mathjax' in Rd Files
- glmmTMB Generalized Linear Mixed Models using Template Model Builder
- ggnewscale Multiple Fill and Colour Scales in 'ggplot2'
- tensor Tensor Product of Arrays
- SeuratObject Data Structures for Single Cell Data
- config Manage Environment Specific Configuration Values
- cards Analysis Results Data
- latticeExtra Extra Graphical Utilities Based on Lattice
- Cairo R Graphics Device using Cairo Graphics Library for Creating High-Quality Bitmap (PNG, JPEG, TIFF), Vector (PDF, SVG, PostScript) and…
- chromote Headless Chrome Web Browser Interface
- qpdf Split, Combine and Compress PDF Files
- gld Estimation and Use of the Generalised (Tukey) Lambda Distribution
- gmp Multiple Precision Arithmetic
- rapidjsonr 'Rapidjson' C++ Header Files
- SnowballC Snowball Stemmers Based on the C 'libstemmer' UTF-8 Library
- ks Kernel Smoothing
- AER Applied Econometrics with R
- segmented Regression Models with Break-Points / Change-Points Estimation (with Possibly Random Effects)
- shinyWidgets Custom Inputs Widgets for Shiny
- spData Datasets for Spatial Analysis
- munsell Utilities for Using Munsell Colours
- gson Base Class and Methods for 'gson' Format
- fixest Fast Fixed-Effects Estimations
- lobstr Visualize R Data Structures with Trees
- Exact Unconditional Exact Test
- fields Tools for Spatial Data
- snowflakeauth Authentication Helpers for 'Snowflake'
- libcoin Linear Test Statistics for Permutation Inference
- pcaPP Robust PCA by Projection Pursuit
- circlize Circular Visualization
- gam Generalized Additive Models
- RPostgres C++ Interface to PostgreSQL
- chron Chronological Objects which Can Handle Dates and Times
- pander An R 'Pandoc' Writer
- GlobalOptions Generate Functions to Get or Set Global Options
- stringmagic Character String Operations and Interpolation, Magic Edition
- collapse Advanced and Fast Data Transformation
- dbscan Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms
- ade4 Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
- effects Effect Displays for Linear, Generalized Linear, and Other Models
- coin Conditional Inference Procedures in a Permutation Test Framework
- torch Tensors and Neural Networks with 'GPU' Acceleration
- RcppHNSW 'Rcpp' Bindings for 'hnswlib', a Library for Approximate Nearest Neighbors
- corpcor Efficient Estimation of Covariance and (Partial) Correlation
- truncnorm Truncated Normal Distribution
- nanonext Lightweight Toolkit for Messaging, Concurrency and the Web
- mapproj Map Projections
- pacman Package Management Tool
- shinydashboard Create Dashboards with 'Shiny'
- CompQuadForm Distribution Function of Quadratic Forms in Normal Variables
- rlist A Toolbox for Non-Tabular Data Manipulation
- geometries Convert Between R Objects and Geometric Structures
- broom.mixed Tidying Methods for Mixed Models
- sfheaders Converts Between R Objects and Simple Feature Objects
- tmap Thematic Maps
- brms Bayesian Regression Models using 'Stan'
- DiagrammeR Graph/Network Visualization
- cardx Extra Analysis Results Data Utilities
- scatterpie Scatter Pie Plot
- VGAM Vector Generalized Linear and Additive Models
- jsonify Convert Between 'R' Objects and Javascript Object Notation (JSON)
- Brobdingnag Very Large Numbers in R
- rugarch Univariate GARCH Models
- bibliometrix Comprehensive Science Mapping Analysis
- geojsonsf GeoJSON to Simple Feature Converter
- gdata Various R Programming Tools for Data Manipulation
- tidytext Text Mining using 'dplyr', 'ggplot2', and Other Tidy Tools
- metadat Meta-Analysis Datasets
- packrat A Dependency Management System for Projects and their R Package Dependencies
- ggbeeswarm Categorical Scatter (Violin Point) Plots
- drc Dose-Response Analysis Using R
- rngtools Utility Functions for Working with Random Number Generators
- dreamerr Error Handling Made Easy
- plumber An API Generator for R
- rpart.plot Plot 'rpart' Models: An Enhanced Version of 'plot.rpart'
- maptiles Download and Display Map Tiles
- bridgesampling Bridge Sampling for Marginal Likelihoods and Bayes Factors
- pixmap Bitmap Images / Pixel Maps
- beeswarm The Bee Swarm Plot, an Alternative to Stripchart
- Rsolnp General Non-Linear Optimization
- rio A Swiss-Army Knife for Data I/O
- skimr Compact and Flexible Summaries of Data
- lwgeom Bindings to Selected 'liblwgeom' Functions for Simple Features
- vipor Plot Categorical Data Using Quasirandom Noise and Density Estimates
- RhpcBLASctl Control the Number of Threads on 'BLAS'
- spatstat Spatial Point Pattern Analysis, Model-Fitting, Simulation, Tests
- sctransform Variance Stabilizing Transformations for Single Cell UMI Data
- multicool Permutations of Multisets in Cool-Lex Order
- parsnip A Common API to Modeling and Analysis Functions
- survminer Drawing Survival Curves using 'ggplot2'
- mirai Minimalist Async Evaluation Framework for R
- seriation Infrastructure for Ordering Objects Using Seriation
- plm Linear Models for Panel Data
- ggtangle Draw Network with Data
- qap Heuristics for the Quadratic Assignment Problem (QAP)
- bnlearn Bayesian Network Structure Learning, Parameter Learning and Inference
- cyclocomp Cyclomatic Complexity of R Code
- agricolae Statistical Procedures for Agricultural Research
- rsvd Randomized Singular Value Decomposition
- TSP Infrastructure for the Traveling Salesperson Problem
- anytime Anything to 'POSIXct' or 'Date' Converter
- marginaleffects Predictions, Comparisons, Slopes, Marginal Means, and Hypothesis Tests
- mapview Interactive Viewing of Spatial Data in R
- GetoptLong Parsing Command-Line Arguments
- maxLik Maximum Likelihood Estimation and Related Tools
- registry Infrastructure for R Package Registries
- RTMB 'R' Bindings for 'TMB'
- janeaustenr Jane Austen's Complete Novels
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